Package: fbi 0.11.22.9000
William K. Morris
fbi: Finnish Biodiversity Indicators
Finnish biodiversity indicators is a service providing time series of abundance indices and related metrics for Finland. The input data for the indices are provided by the Finnish Biodiversity Information Facility.
Authors:
fbi_0.11.22.9000.tar.gz
fbi_0.11.22.9000.zip(r-4.5)fbi_0.11.22.9000.zip(r-4.4)fbi_0.11.22.9000.zip(r-4.3)
fbi_0.11.22.9000.tgz(r-4.4-any)fbi_0.11.22.9000.tgz(r-4.3-any)
fbi_0.11.22.9000.tar.gz(r-4.5-noble)fbi_0.11.22.9000.tar.gz(r-4.4-noble)
fbi_0.11.22.9000.tgz(r-4.4-emscripten)fbi_0.11.22.9000.tgz(r-4.3-emscripten)
fbi.pdf |fbi.html✨
fbi/json (API)
| # Install 'fbi' in R: |
| install.packages('fbi', repos = c('https://luomus.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/luomus/fin-biodiv-indicators/issues
Last updated 9 days agofrom:1db275f77c (on dev). Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 30 2024 |
| R-4.5-win | OK | Aug 30 2024 |
| R-4.5-linux | OK | Aug 30 2024 |
| R-4.4-win | OK | Aug 30 2024 |
| R-4.4-mac | OK | Aug 30 2024 |
| R-4.3-win | OK | Aug 30 2024 |
| R-4.3-mac | OK | Aug 30 2024 |
Exports:check_inputclean_cachecombine_with_surveysformat_dateget_indicesget_outputpick_first_survey_in_fortnightpick_first_survey_in_winterpick_first_survey_in_yearprocess_funsremove_all_zero_locationsrequire_minimum_gapsrequire_minimum_weeksrequire_seven_fortnightsrequire_two_yearsset_start_yearsum_by_eventsum_over_sectionsupdate_dataupdate_indexupdate_taxon_indexzero_fill
Dependencies:abindarmaskpassbiglmblobbootclicodacolorspaceconfigcpp11curldata.tableDBIdbplyrdigestdplyrfansifarverfinbifgenericsggplot2gluegtablehttrisobandjsonlitelabelinglaterlatticelifecyclelme4lubridatelutzmagrittrMASSMatrixmgcvmimeminqamunsellnlmenloptropensslpillarpkgconfigpoolpurrrR6rbmsRColorBrewerRcppRcppEigenrlangrtrimscalesspeedglmstringistringrsvglitesyssystemfontstibbletidyrtidyselecttimechangeutf8vctrsviridisLitewithryaml
Alpine Bird Indicator
Rendered fromalpine-birds.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Butterfly Abundance Indicator
Rendered frombutterfly-abundance.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Community temperature index
Rendered fromcommunity-temperature-index.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Community Temperature Indices
Rendered fromcommunity-temperature-indices.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Configuration
Rendered fromconfiguration.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Farmland Bird Indicator
Rendered fromfarmland-birds.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Farmland Butterfly Indicator
Rendered fromfarmland-butterflies.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Forest Bird Indicator
Rendered fromforest-birds.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Mire Bird Indicator
Rendered frommire-birds.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Moth Indicator
Rendered frommoths.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Multi-taxon indicator (trim)
Rendered frommulti-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Overall abundance
Rendered fromoverall-abundance.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Overview
Rendered fromoverview.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Single-taxon indicator (rbms)
Rendered fromsingle-taxon-indicator-rbms.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Single-taxon indicator (trim)
Rendered fromsingle-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Winter Bird Indicator
Rendered fromwinter-birds.Rmdusingknitr::rmarkdownon Aug 30 2024.Last update: 2024-01-02
Started: 2024-01-02
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Check input | check_input |
| Clean cache | clean_cache |
| Combine with surveys | combine_with_surveys |
| Format date | format_date |
| Get indices | get_indices |
| Get output | get_output |
| Pick first survey in fortnight | pick_first_survey_in_fortnight |
| Pick first survey in winter | pick_first_survey_in_winter |
| Pick first survey in year | pick_first_survey_in_year |
| Process functions | process_funs |
| Remove all-zero locations | remove_all_zero_locations |
| Require minimum gaps | require_minimum_gaps |
| Require minimum weeks | require_minimum_weeks |
| Require seven fortnights | require_seven_fortnights |
| Require at least two years | require_two_years |
| Set start year | set_start_year |
| Sum by event | sum_by_event |
| Sum over sections | sum_over_sections |
| Update data | update_data |
| Update index | update_index |
| Update taxon index | update_taxon_index |
| Zero fill | zero_fill |
