Package: fbi 0.11.24.9000

William K. Morris

fbi: Finnish Biodiversity Indicators

Finnish biodiversity indicators is a service providing time series of abundance indices and related metrics for Finland. The input data for the indices are provided by the Finnish Biodiversity Information Facility.

Authors:Finnish Museum of Natural History - Luomus [cph], William K. Morris [aut, cre]

fbi_0.11.24.9000.tar.gz
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fbi_0.11.24.9000.tgz(r-4.4-any)fbi_0.11.24.9000.tgz(r-4.3-any)
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fbi.pdf |fbi.html✨
fbi/json (API)

# Install 'fbi' in R:

install.packages('fbi', repos = c('https://luomus.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/luomus/fin-biodiv-indicators/issues

On CRAN:

5.87 score 55 scripts 22 exports 71 dependencies

Last updated 2 months agofrom:b1eff218ac (on dev). Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Oct 27 2024
R-4.5-win	OK	Oct 27 2024
R-4.5-linux	OK	Oct 27 2024
R-4.4-win	OK	Oct 27 2024
R-4.4-mac	OK	Oct 27 2024
R-4.3-win	OK	Oct 27 2024
R-4.3-mac	OK	Oct 27 2024

Exports:check_input clean_cache combine_with_surveys format_date get_indices get_output pick_first_survey_in_fortnight pick_first_survey_in_winter pick_first_survey_in_year process_funs remove_all_zero_locations require_minimum_gaps require_minimum_weeks require_seven_fortnights require_two_years set_start_year sum_by_event sum_over_sections update_data update_index update_taxon_index zero_fill

Dependencies:abind arm askpass biglm blob boot cli coda colorspace config cpp11 curl data.table DBI dbplyr digest dplyr fansi farver finbif generics ggplot2 glue gtable httr isoband jsonlite labeling later lattice lifecycle lme4 lubridate lutz magrittr MASS Matrix mgcv mime minqa munsell nlme nloptr openssl pillar pkgconfig pool purrr R6 rbms RColorBrewer Rcpp RcppEigen rlang rtrim scales speedglm stringi stringr svglite sys systemfonts tibble tidyr tidyselect timechange utf8 vctrs viridisLite withr yaml

Alpine Bird Indicator

Rendered fromalpine-birds.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Butterfly Abundance Indicator

Rendered frombutterfly-abundance.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Community temperature index

Rendered fromcommunity-temperature-index.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Community Temperature Indices

Rendered fromcommunity-temperature-indices.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Configuration

Rendered fromconfiguration.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Farmland Bird Indicator

Rendered fromfarmland-birds.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Farmland Butterfly Indicator

Rendered fromfarmland-butterflies.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Forest Bird Indicator

Rendered fromforest-birds.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Mire Bird Indicator

William K. Morris

Rendered frommire-birds.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Moth Indicator

Rendered frommoths.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Multi-taxon indicator (trim)

Rendered frommulti-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Overall abundance

Rendered fromoverall-abundance.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Overview

Rendered fromoverview.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Single-taxon indicator (rbms)

Rendered fromsingle-taxon-indicator-rbms.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Single-taxon indicator (trim)

Rendered fromsingle-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Winter Bird Indicator

Rendered fromwinter-birds.Rmdusingknitr::rmarkdownon Oct 27 2024.

Last update: 2024-01-02
Started: 2024-01-02

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Check input	check_input
Clean cache	clean_cache
Combine with surveys	combine_with_surveys
Format date	format_date
Get indices	get_indices
Get output	get_output
Pick first survey in fortnight	pick_first_survey_in_fortnight
Pick first survey in winter	pick_first_survey_in_winter
Pick first survey in year	pick_first_survey_in_year
Process functions	process_funs
Remove all-zero locations	remove_all_zero_locations
Require minimum gaps	require_minimum_gaps
Require minimum weeks	require_minimum_weeks
Require seven fortnights	require_seven_fortnights
Require at least two years	require_two_years
Set start year	set_start_year
Sum by event	sum_by_event
Sum over sections	sum_over_sections
Update data	update_data
Update index	update_index
Update taxon index	update_taxon_index
Zero fill	zero_fill

Usage by other packages (reverse dependencies)