Package: fbi 0.11.24.9000

William K. Morris

fbi: Finnish Biodiversity Indicators

Finnish biodiversity indicators is a service providing time series of abundance indices and related metrics for Finland. The input data for the indices are provided by the Finnish Biodiversity Information Facility.

Authors:Finnish Museum of Natural History - Luomus [cph], William K. Morris [aut, cre]

fbi_0.11.24.9000.tar.gz
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fbi_0.11.24.9000.tgz(r-4.4-any)fbi_0.11.24.9000.tgz(r-4.3-any)
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fbi.pdf |fbi.html
fbi/json (API)

# Install 'fbi' in R:
install.packages('fbi', repos = c('https://luomus.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/luomus/fin-biodiv-indicators/issues

Pkgdown:https://indicators.laji.fi

On CRAN:

5.90 score 58 scripts 22 exports 71 dependencies

Last updated 2 months agofrom:b1eff218ac (on dev). Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 26 2024
R-4.5-winOKNov 26 2024
R-4.5-linuxOKNov 26 2024
R-4.4-winOKNov 26 2024
R-4.4-macOKNov 26 2024
R-4.3-winOKNov 26 2024
R-4.3-macOKNov 26 2024

Exports:check_inputclean_cachecombine_with_surveysformat_dateget_indicesget_outputpick_first_survey_in_fortnightpick_first_survey_in_winterpick_first_survey_in_yearprocess_funsremove_all_zero_locationsrequire_minimum_gapsrequire_minimum_weeksrequire_seven_fortnightsrequire_two_yearsset_start_yearsum_by_eventsum_over_sectionsupdate_dataupdate_indexupdate_taxon_indexzero_fill

Dependencies:abindarmaskpassbiglmblobbootclicodacolorspaceconfigcpp11curldata.tableDBIdbplyrdigestdplyrfansifarverfinbifgenericsggplot2gluegtablehttrisobandjsonlitelabelinglaterlatticelifecyclelme4lubridatelutzmagrittrMASSMatrixmgcvmimeminqamunsellnlmenloptropensslpillarpkgconfigpoolpurrrR6rbmsRColorBrewerRcppRcppEigenrlangrtrimscalesspeedglmstringistringrsvglitesyssystemfontstibbletidyrtidyselecttimechangeutf8vctrsviridisLitewithryaml

Alpine Bird Indicator

Rendered fromalpine-birds.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Butterfly Abundance Indicator

Rendered frombutterfly-abundance.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Community temperature index

Rendered fromcommunity-temperature-index.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Community Temperature Indices

Rendered fromcommunity-temperature-indices.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Configuration

Rendered fromconfiguration.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Farmland Bird Indicator

Rendered fromfarmland-birds.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Farmland Butterfly Indicator

Rendered fromfarmland-butterflies.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Forest Bird Indicator

Rendered fromforest-birds.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Mire Bird Indicator

Rendered frommire-birds.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Moth Indicator

Rendered frommoths.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Multi-taxon indicator (trim)

Rendered frommulti-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Overall abundance

Rendered fromoverall-abundance.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Overview

Rendered fromoverview.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Single-taxon indicator (rbms)

Rendered fromsingle-taxon-indicator-rbms.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Single-taxon indicator (trim)

Rendered fromsingle-taxon-indicator-trim.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Winter Bird Indicator

Rendered fromwinter-birds.Rmdusingknitr::rmarkdownon Nov 26 2024.

Last update: 2024-01-02
Started: 2024-01-02

Readme and manuals

Help Manual

Help pageTopics
Check inputcheck_input
Clean cacheclean_cache
Combine with surveyscombine_with_surveys
Format dateformat_date
Get indicesget_indices
Get outputget_output
Pick first survey in fortnightpick_first_survey_in_fortnight
Pick first survey in winterpick_first_survey_in_winter
Pick first survey in yearpick_first_survey_in_year
Process functionsprocess_funs
Remove all-zero locationsremove_all_zero_locations
Require minimum gapsrequire_minimum_gaps
Require minimum weeksrequire_minimum_weeks
Require seven fortnightsrequire_seven_fortnights
Require at least two yearsrequire_two_years
Set start yearset_start_year
Sum by eventsum_by_event
Sum over sectionssum_over_sections
Update dataupdate_data
Update indexupdate_index
Update taxon indexupdate_taxon_index
Zero fillzero_fill